Class: ExposureEvent

An occurrence in a study where a subject is exposed to a stressor under defined conditions.

URI: zebrafish_toxicology_atlas_schema:ExposureEvent

classDiagram class ExposureEvent click ExposureEvent href "../ExposureEvent/" Entity <|-- ExposureEvent click Entity href "../Entity/" ExposureEvent : additional_exposure_condition ExposureEvent : comment ExposureEvent : exposure_end_stage ExposureEvent : exposure_start_stage ExposureEvent : exposure_type ExposureEvent --> "0..1" ExposureTypeEnum : exposure_type click ExposureTypeEnum href "../ExposureTypeEnum/" ExposureEvent : phenotype_observation ExposureEvent --> "*" PhenotypeObservationSet : phenotype_observation click PhenotypeObservationSet href "../PhenotypeObservationSet/" ExposureEvent : regimen ExposureEvent --> "0..1" Regimen : regimen click Regimen href "../Regimen/" ExposureEvent : route ExposureEvent --> "0..1" ExposureRouteEnum : route click ExposureRouteEnum href "../ExposureRouteEnum/" ExposureEvent : stressor ExposureEvent --> "*" StressorChemical : stressor click StressorChemical href "../StressorChemical/" ExposureEvent : uuid ExposureEvent : vehicle ExposureEvent --> "*" VehicleEnumeration : vehicle click VehicleEnumeration href "../VehicleEnumeration/"

Inheritance

Entity
- ExposureEvent

Slots

Name	Cardinality and Range	Description	Inheritance
stressor	* StressorChemical	Substance, chemical or toxicant that elicits a response (a phenotype) in a su...	direct
vehicle	* VehicleEnumeration	The substance or medium used to deliver a stressor	direct
route	0..1 ExposureRouteEnum	The route of exposure	direct
regimen	0..1 Regimen	The regimen for the exposure	direct
exposure_start_stage	0..1 Uriorcurie	The developmental stage of fish when exposure started	direct
exposure_end_stage	0..1 Uriorcurie	The developmental stage of fish when exposure ended	direct
comment	0..1 String	Additional comments	direct
exposure_type	0..1 ExposureTypeEnum	An instance of exposure specifying the type of stressor a subject was exposed...	direct
additional_exposure_condition	0..1 String	Additional information about the conditions under which exposure event occurr...	direct
phenotype_observation	* PhenotypeObservationSet	The phenotype observation resulting from an exposure event	direct
uuid	1 String	UUID identifier	Entity

Usages

used by	used in	type	used
Experiment	exposure_event	range	ExposureEvent

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema

Mappings

Mapping Type	Mapped Value
self	zebrafish_toxicology_atlas_schema:ExposureEvent
native	zebrafish_toxicology_atlas_schema:ExposureEvent
exact	biolink:ExposureEvent

LinkML Source

Direct

name: ExposureEvent
description: An occurrence in a study where a subject is exposed to a stressor under
  defined conditions.
from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
exact_mappings:
- biolink:ExposureEvent
is_a: Entity
slots:
- stressor
- vehicle
- route
- regimen
- exposure_start_stage
- exposure_end_stage
- comment
- exposure_type
- additional_exposure_condition
- phenotype_observation

Induced

name: ExposureEvent
description: An occurrence in a study where a subject is exposed to a stressor under
  defined conditions.
from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
exact_mappings:
- biolink:ExposureEvent
is_a: Entity
attributes:
  stressor:
    name: stressor
    description: Substance, chemical or toxicant that elicits a response (a phenotype)
      in a subject when encountered through exposure.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    alias: stressor
    owner: ExposureEvent
    domain_of:
    - ExposureEvent
    range: StressorChemical
    multivalued: true
    inlined: true
    inlined_as_list: true
  vehicle:
    name: vehicle
    description: The substance or medium used to deliver a stressor.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    alias: vehicle
    owner: ExposureEvent
    domain_of:
    - ExposureEvent
    range: VehicleEnumeration
    multivalued: true
  route:
    name: route
    description: The route of exposure.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    alias: route
    owner: ExposureEvent
    domain_of:
    - ExposureEvent
    range: ExposureRouteEnum
  regimen:
    name: regimen
    description: The regimen for the exposure.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    alias: regimen
    owner: ExposureEvent
    domain_of:
    - ExposureEvent
    range: Regimen
    multivalued: false
    inlined: true
    inlined_as_list: true
  exposure_start_stage:
    name: exposure_start_stage
    description: The developmental stage of fish when exposure started.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    alias: exposure_start_stage
    owner: ExposureEvent
    domain_of:
    - ExposureEvent
    range: uriorcurie
    multivalued: false
  exposure_end_stage:
    name: exposure_end_stage
    description: The developmental stage of fish when exposure ended.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    alias: exposure_end_stage
    owner: ExposureEvent
    domain_of:
    - ExposureEvent
    range: uriorcurie
    multivalued: false
  comment:
    name: comment
    description: Additional comments.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    alias: comment
    owner: ExposureEvent
    domain_of:
    - Control
    - ExposureEvent
    - StressorChemical
    range: string
  exposure_type:
    name: exposure_type
    description: An instance of exposure specifying the type of stressor a subject
      was exposed to.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    alias: exposure_type
    owner: ExposureEvent
    domain_of:
    - ExposureEvent
    range: ExposureTypeEnum
  additional_exposure_condition:
    name: additional_exposure_condition
    description: Additional information about the conditions under which exposure
      event occurred.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    alias: additional_exposure_condition
    owner: ExposureEvent
    domain_of:
    - ExposureEvent
    range: string
  phenotype_observation:
    name: phenotype_observation
    description: The phenotype observation resulting from an exposure event.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    alias: phenotype_observation
    owner: ExposureEvent
    domain_of:
    - ExposureEvent
    range: PhenotypeObservationSet
    multivalued: true
    inlined: true
    inlined_as_list: true
  uuid:
    name: uuid
    description: UUID identifier.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    identifier: true
    alias: uuid
    owner: ExposureEvent
    domain_of:
    - Entity
    range: string
    required: true