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Class: StressorChemical

A chemical, that elicit a response (a phenotype) in a subject when when encountered through exposure.

URI: zebrafish_toxicology_atlas_schema:StressorChemical

classDiagram class StressorChemical click StressorChemical href "../StressorChemical/" Entity <|-- StressorChemical click Entity href "../Entity/" StressorChemical : chemical_id StressorChemical --> "1" ChemicalEntity : chemical_id click ChemicalEntity href "../ChemicalEntity/" StressorChemical : comment StressorChemical : concentration StressorChemical --> "1" QuantityValue : concentration click QuantityValue href "../QuantityValue/" StressorChemical : manufacturer StressorChemical : uuid

Inheritance

Slots

Name Cardinality and Range Description Inheritance
chemical_id 1
ChemicalEntity		 Chemical identifier (CHEBI, CAS, or UUID) direct
manufacturer 0..1
String		 The manufacturer of the chemical direct
concentration 1
QuantityValue		 The dose or concentration of the chemical to which the subject was exposed to direct
comment 0..1
String		 Additional comments direct
uuid 1
String		 UUID identifier Entity

Usages

used by used in type used
ExposureEvent stressor range StressorChemical

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema

Mappings

Mapping Type Mapped Value
self zebrafish_toxicology_atlas_schema:StressorChemical
native zebrafish_toxicology_atlas_schema:StressorChemical

LinkML Source

Direct

name: StressorChemical
description: A chemical, that elicit a response (a phenotype) in a subject when when
  encountered through exposure.
from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
is_a: Entity
slots:
- chemical_id
- manufacturer
- concentration
- comment

Induced

name: StressorChemical
description: A chemical, that elicit a response (a phenotype) in a subject when when
  encountered through exposure.
from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
is_a: Entity
attributes:
  chemical_id:
    name: chemical_id
    description: Chemical identifier (CHEBI, CAS, or UUID).
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    alias: chemical_id
    owner: StressorChemical
    domain_of:
    - StressorChemical
    range: ChemicalEntity
    required: true
    inlined: true
    inlined_as_list: true
  manufacturer:
    name: manufacturer
    description: The manufacturer of the chemical.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    alias: manufacturer
    owner: StressorChemical
    domain_of:
    - StressorChemical
    range: string
  concentration:
    name: concentration
    description: The dose or concentration of the chemical to which the subject was
      exposed to.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    alias: concentration
    owner: StressorChemical
    domain_of:
    - StressorChemical
    range: QuantityValue
    required: true
    inlined: true
    inlined_as_list: true
  comment:
    name: comment
    description: Additional comments.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    alias: comment
    owner: StressorChemical
    domain_of:
    - Control
    - ExposureEvent
    - StressorChemical
    range: string
  uuid:
    name: uuid
    description: UUID identifier.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    identifier: true
    alias: uuid
    owner: StressorChemical
    domain_of:
    - Entity
    range: string
    required: true