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Class: ExposureEvent

An occurrence in a study where a subject is exposed to a stressor under defined conditions.

URI: zebrafish_toxicology_atlas_schema:ExposureEvent

classDiagram class ExposureEvent click ExposureEvent href "../ExposureEvent/" ZappEntity <|-- ExposureEvent click ZappEntity href "../ZappEntity/" ExposureEvent : additional_exposure_condition ExposureEvent : comment ExposureEvent : exposure_end_stage ExposureEvent : exposure_start_stage ExposureEvent : exposure_type ExposureEvent --> "0..1" ExposureType : exposure_type click ExposureType href "../ExposureType/" ExposureEvent : id ExposureEvent : phenotype_observation ExposureEvent --> "*" PhenotypeObservationSet : phenotype_observation click PhenotypeObservationSet href "../PhenotypeObservationSet/" ExposureEvent : regimen ExposureEvent --> "0..1" Regimen : regimen click Regimen href "../Regimen/" ExposureEvent : route ExposureEvent --> "0..1" ExposureRoute : route click ExposureRoute href "../ExposureRoute/" ExposureEvent : stressor ExposureEvent --> "*" StressorChemical : stressor click StressorChemical href "../StressorChemical/" ExposureEvent : vehicle ExposureEvent --> "*" VehicleOfTransmission : vehicle click VehicleOfTransmission href "../VehicleOfTransmission/"

Inheritance

Slots

Name Cardinality and Range Description Inheritance
stressor *
StressorChemical		 Substance, chemical or toxicant that elicits a response (a phenotype) in a su... direct
vehicle *
VehicleOfTransmission		 The substance or medium used to deliver a stressor direct
route 0..1
ExposureRoute		 The route of exposure direct
regimen 0..1
Regimen		 The regimen for the exposure direct
exposure_start_stage 0..1
Uriorcurie		 The developmental stage of fish when exposure started direct
exposure_end_stage 0..1
Uriorcurie		 The developmental stage of fish when exposure ended direct
comment 0..1
String		 Additional comments direct
exposure_type 0..1
ExposureType		 An instance of exposure specifying the type of stressor a subject was exposed... direct
additional_exposure_condition 0..1
String		 Additional information about the conditions under which exposure event occurr... direct
phenotype_observation *
PhenotypeObservationSet		 The phenotype observation resulting from an exposure event direct
id 1
Integer		 Auto-generated integer identifier ZappEntity

Usages

used by used in type used
Experiment exposure_event range ExposureEvent

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema

Mappings

Mapping Type Mapped Value
self zebrafish_toxicology_atlas_schema:ExposureEvent
native zebrafish_toxicology_atlas_schema:ExposureEvent
exact biolink:ExposureEvent

LinkML Source

Direct

name: ExposureEvent
description: An occurrence in a study where a subject is exposed to a stressor under
  defined conditions.
from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
exact_mappings:
- biolink:ExposureEvent
is_a: ZappEntity
slots:
- stressor
- vehicle
- route
- regimen
- exposure_start_stage
- exposure_end_stage
- comment
- exposure_type
- additional_exposure_condition
- phenotype_observation

Induced

name: ExposureEvent
description: An occurrence in a study where a subject is exposed to a stressor under
  defined conditions.
from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
exact_mappings:
- biolink:ExposureEvent
is_a: ZappEntity
attributes:
  stressor:
    name: stressor
    description: Substance, chemical or toxicant that elicits a response (a phenotype)
      in a subject when encountered through exposure.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    owner: ExposureEvent
    domain_of:
    - ExposureEvent
    range: StressorChemical
    multivalued: true
    inlined: true
    inlined_as_list: true
  vehicle:
    name: vehicle
    description: The substance or medium used to deliver a stressor.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    owner: ExposureEvent
    domain_of:
    - ExposureEvent
    range: VehicleOfTransmission
    multivalued: true
    inlined: true
    inlined_as_list: true
  route:
    name: route
    description: The route of exposure.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    owner: ExposureEvent
    domain_of:
    - ExposureEvent
    range: ExposureRoute
    inlined: true
    inlined_as_list: true
  regimen:
    name: regimen
    description: The regimen for the exposure.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    owner: ExposureEvent
    domain_of:
    - ExposureEvent
    range: Regimen
    multivalued: false
    inlined: true
    inlined_as_list: true
  exposure_start_stage:
    name: exposure_start_stage
    description: The developmental stage of fish when exposure started.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    owner: ExposureEvent
    domain_of:
    - ExposureEvent
    range: uriorcurie
    multivalued: false
  exposure_end_stage:
    name: exposure_end_stage
    description: The developmental stage of fish when exposure ended.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    owner: ExposureEvent
    domain_of:
    - ExposureEvent
    range: uriorcurie
    multivalued: false
  comment:
    name: comment
    description: Additional comments.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    owner: ExposureEvent
    domain_of:
    - Control
    - ExposureEvent
    - StressorChemical
    - VehicleOfTransmission
    range: string
  exposure_type:
    name: exposure_type
    description: An instance of exposure specifying the type of stressor a subject
      was exposed to.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    owner: ExposureEvent
    domain_of:
    - ExposureEvent
    range: ExposureType
    inlined: true
    inlined_as_list: true
  additional_exposure_condition:
    name: additional_exposure_condition
    description: Additional information about the conditions under which exposure
      event occurred.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    owner: ExposureEvent
    domain_of:
    - ExposureEvent
    range: string
  phenotype_observation:
    name: phenotype_observation
    description: The phenotype observation resulting from an exposure event.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    owner: ExposureEvent
    domain_of:
    - ExposureEvent
    range: PhenotypeObservationSet
    multivalued: true
    inlined: true
    inlined_as_list: true
  id:
    name: id
    description: Auto-generated integer identifier.
    from_schema: https://w3id.org/sierra-moxon/zebrafish-toxicology-atlas-schema
    rank: 1000
    identifier: true
    owner: ExposureEvent
    domain_of:
    - ZappEntity
    range: integer
    required: true